Evolutionary Analysis Download Ebook PDF Epub Online

Author : Scott Freeman
Jon C. Herron
Publisher :
Release : 2014-08-08
Page : 864
Category : Evolution
ISBN 13 : 9781292061276
Description :


For undergraduate courses in Evolution By presenting evolutionary biology as a dynamic, ongoing research effort and organizing discussions around questions, this best-selling text helps students think like scientists as they learn about evolution. The authors convey the excitement and logic of evolutionary science by introducing principles through recent and classical studies, and by emphasizing real-world applications. In the Fifth Edition, co-author Jon Herron takes the lead in streamlining and updating content to reflect key changes in the field. The design and art program have also been updated for enhanced clarity.


Author : Jon C. Herron
Scott Freeman
Publisher : Benjamin-Cummings Publishing Company
Release : 2014
Page : 850
Category : Science
ISBN 13 : 9780321616678
Description :


Enhanced by the most up-to-date information available, including a text-specific web-site, this book provides coverage of both microevolution and macroevolution through a variety of taxonomic groups. It focuses throughout on phylogenetic trees.


Author : Scott Freeman
Jon C. Herron
Publisher : Prentice Hall
Release : 2004
Page : 802
Category : Education
ISBN 13 : 9780131063303
Description :



Author : Scott Freeman
Jon C. Herron
Publisher :
Release : 2003
Page : 770
Category : Evolution (Biology)
ISBN 13 : 9780536749635
Description :



Author : Jon C. Herron
Scott Freeman
Publisher : Pearson Higher Ed
Release : 2013-07-29
Page : 848
Category : Science
ISBN 13 : 0321868994
Description :


This is the eBook of the printed book and may not include any media, website access codes, or print supplements that may come packaged with the bound book. For undergraduate courses in Evolution By presenting evolutionary biology as a dynamic, ongoing research effort and organizing discussions around questions, this best-selling text helps you think like a scientist as you learn about evolution. The authors convey the excitement and logic of evolutionary science by introducing principles through recent and classical studies, and by emphasizing real-world applications. In the Fifth Edition, co-author Jon Herron takes the lead in streamlining and updating content to reflect key changes in the field. The design and art program have also been updated for enhanced clarity.


Author : Scott Freeman
Jon C. Herron
Publisher : Pearson Higher Ed
Release : 2015-04-13
Page : 864
Category : Science
ISBN 13 : 1292082682
Description :


For undergraduate courses in Evolution By presenting evolutionary biology as a dynamic, ongoing research effort and organizing discussions around questions, this best-selling text helps students think like scientists as they learn about evolution. The authors convey the excitement and logic of evolutionary science by introducing principles through recent and classical studies, and by emphasizing real-world applications. In the Fifth Edition, co-author Jon Herron takes the lead in streamlining and updating content to reflect key changes in the field. The design and art program have also been updated for enhanced clarity.


Author : Alexei J. Drummond
Remco R. Bouckaert
Publisher : Cambridge University Press
Release : 2015-08-06
Page : 260
Category : Science
ISBN 13 : 1107019656
Description :


Covers theory, practice and programming in Bayesian phylogenetics with BEAST. The why, how and what of BEAST 2.


Author : Glenn-Peter Sætre
Mark Ravinet
Publisher : Oxford University Press, USA
Release : 2019-05
Page : 336
Category : Science
ISBN 13 : 0198830912
Description :


Evolutionary genetics is the study of how genetic variation leads to evolutionary change. With the recent explosion in the availability of whole genome sequence data, vast quantities of genetic data are being generated at an ever-increasing pace with the result that programming has become an essential tool for researchers. Most importantly, a thorough understanding of evolutionary principles is essential for making sense of this genetic data. This up-to-date textbook covers all the major components of modern evolutionary genetics, carefully explaining fundamental processes such as mutation, natural selection, genetic drift, and speciation, together with their consequences. The book also draws on a rich literature of exciting and inspiring examples to demonstrate the diversity of evolutionary research, including an emphasis on how evolution and selection has shaped our own species. Furthermore, at the end of each chapter, study questions are provided to motivate the reader to think and reflect on the concepts introduced. Practical experience is essential when it comes to developing an understanding of how to use genetic and genomic data to analyze and address interesting questions in the life sciences and how to interpret results in meaningful ways. In addition to the main text, a series of online tutorials using the R language serves as an introduction to programming, statistics, and the analysis of evolutionary genetic data. The R environment stands out as an ideal all-purpose, open source platform to handle and analyze such data. The book and its online materials take full advantage of the authors' own experience in working in a post-genomic revolution world, and introduce readers to the plethora of molecular and analytical methods that have only recently become available.


Author : Emmanuel Paradis
Publisher : Springer Science & Business Media
Release : 2011-11-06
Page : 386
Category : Science
ISBN 13 : 1461417430
Description :


The increasing availability of molecular and genetic databases coupled with the growing power of computers gives biologists opportunities to address new issues, such as the patterns of molecular evolution, and re-assess old ones, such as the role of adaptation in species diversification. In the second edition, the book continues to integrate a wide variety of data analysis methods into a single and flexible interface: the R language. This open source language is available for a wide range of computer systems and has been adopted as a computational environment by many authors of statistical software. Adopting R as a main tool for phylogenetic analyses will ease the workflow in biologists' data analyses, ensure greater scientific repeatability, and enhance the exchange of ideas and methodological developments. The second edition is completed updated, covering the full gamut of R packages for this area that have been introduced to the market since its previous publication five years ago. There is also a new chapter on the simulation of evolutionary data. Graduate students and researchers in evolutionary biology can use this book as a reference for data analyses, whereas researchers in bioinformatics interested in evolutionary analyses will learn how to implement these methods in R. The book starts with a presentation of different R packages and gives a short introduction to R for phylogeneticists unfamiliar with this language. The basic phylogenetic topics are covered: manipulation of phylogenetic data, phylogeny estimation, tree drawing, phylogenetic comparative methods, and estimation of ancestral characters. The chapter on tree drawing uses R's powerful graphical environment. A section deals with the analysis of diversification with phylogenies, one of the author's favorite research topics. The last chapter is devoted to the development of phylogenetic methods with R and interfaces with other languages (C and C++). Some exercises conclude these chapters.


Author : Melissa Payton
Eric Stavney
Publisher : Prentice Hall
Release : 2004
Page : 64
Category : Science
ISBN 13 : 9780131136748
Description :


Gives students access to the most current information available via EBSCO's Content Select Academic Journal Database, The New York Times Search By Subject Archive, “Best of the Web” Link Library and information on the latest news and current events.


Author : Michael P. H. Stumpf
Publisher : World Scientific
Release : 2010
Page : 170
Category : Bayesian statistical decision theory
ISBN 13 : 1848164343
Description :


Networks provide a very useful way to describe a wide range of different data types in biology, physics and elsewhere. Apart from providing a convenient tool to visualize highly dependent data, networks allow stringent mathematical and statistical analysis. In recent years, much progress has been achieved to interpret various types of biological network data such as transcriptomic, metabolomic and protein interaction data as well as epidemiological data. Of particular interest is to understand the organization, complexity and dynamics of biological networks and how these are influenced by network evolution and functionality. This book reviews and explores statistical, mathematical and evolutionary theory and tools in the understanding of biological networks. The book is divided into comprehensive and self-contained chapters, each of which focuses on an important biological network type, explains concepts and theory and illustrates how these can be used to obtain insight into biologically relevant processes and questions. There are chapters covering metabolic, transcriptomic, protein interaction and epidemiological networks as well as chapters that deal with theoretical and conceptual material. The authors, who contribute to the book, are active, highly regarded and well-known in the network community. Sample Chapter(s). Chapter 1: A Network Analysis Primer (350 KB). Contents: A Network Analysis Primer (M P H Stumpf & C Wiuf); Evolutionary Analysis of Protein Interaction Networks (C Wiuf & O Ratmann); Motifs in Biological Networks (F Schreiber & H SchwAbbermeyer); Bayesian Analysis of Biological Networks: Clusters, Motifs, Cross-Species Correlations (J Berg & M Lnssig); Network Concepts and Epidemiological Models (R R Kao & I Z Kiss); Evolutionary Origin and Consequences of Design Properties of Metabolic Networks (T Pfeiffer & S Bonhoeffer); Protein Interactions from an Evolutionary Perspective (F Pazos & A Valencia); Statistical Null Models for Biological Network Analysis (W P Kelly et al.). Readership: Academics, researchers, postgraduates and advanced undergraduates in bioinformatics. Biologists, mathematicians/statisticians, physicists and computer scientists.


Author : Michael P. H. Stumpf
Carsten Wiuf
Publisher : World Scientific
Release : 2010
Page : 170
Category : Science
ISBN 13 : 1848164335
Description :


Networks provide a very useful way to describe a wide range of different data types in biology, physics and elsewhere. Apart from providing a convenient tool to visualize highly dependent data, networks allow stringent mathematical and statistical analysis. In recent years, much progress has been achieved to interpret various types of biological network data such as transcriptomic, metabolomic and protein interaction data as well as epidemiological data. Of particular interest is to understand the organization, complexity and dynamics of biological networks and how these are influenced by network evolution and functionality. This book reviews and explores statistical, mathematical and evolutionary theory and tools in the understanding of biological networks. The book is divided into comprehensive and self-contained chapters, each of which focuses on an important biological network type, explains concepts and theory and illustrates how these can be used to obtain insight into biologically relevant processes and questions. There are chapters covering metabolic, transcriptomic, protein interaction and epidemiological networks as well as chapters that deal with theoretical and conceptual material. The authors, who contribute to the book, are active, highly regarded and well-known in the network community.


Author : Allen G. Rodrigo
Gerald H. Learn Jr.
Publisher : Springer Science & Business Media
Release : 2007-05-08
Page : 300
Category : Medical
ISBN 13 : 0306469006
Description :


Computational and Evolutionary Analysis of HIV Molecular Sequences is for all researchers interested in HIV research, even those who only have a nodding acquaintance with computational biology (or those who are familiar with some, but not all, aspects of the field). HIV research is unusual in that it brings together scientists from a wide range of disciplines: clinicians, pathologists, immunologists, epidemiologists, virologists, computational biologists, structural biologists, evolutionary biologists, statisticians and mathematicians. This book seeks to bridge the gap between these groups, in both subject matter and terminology. Focused largely on HIV genetic variation, Computational and Evolutionary Analysis of HIV Molecular Sequences covers such issues as sampling and processing sequences, population genetics, phylogenetics and drug targets.


Author : Fabio Dercole
Sergio Rinaldi
Publisher : Princeton University Press
Release : 2008-02-11
Page : 360
Category : Mathematics
ISBN 13 : 9781400828340
Description :


Quantitative approaches to evolutionary biology traditionally consider evolutionary change in isolation from an important pressure in natural selection: the demography of coevolving populations. In Analysis of Evolutionary Processes, Fabio Dercole and Sergio Rinaldi have written the first comprehensive book on Adaptive Dynamics (AD), a quantitative modeling approach that explicitly links evolutionary changes to demographic ones. The book shows how the so-called AD canonical equation can answer questions of paramount interest in biology, engineering, and the social sciences, especially economics. After introducing the basics of evolutionary processes and classifying available modeling approaches, Dercole and Rinaldi give a detailed presentation of the derivation of the AD canonical equation, an ordinary differential equation that focuses on evolutionary processes driven by rare and small innovations. The authors then look at important features of evolutionary dynamics as viewed through the lens of AD. They present their discovery of the first chaotic evolutionary attractor, which calls into question the common view that coevolution produces exquisitely harmonious adaptations between species. And, opening up potential new lines of research by providing the first application of AD to economics, they show how AD can explain the emergence of technological variety. Analysis of Evolutionary Processes will interest anyone looking for a self-contained treatment of AD for self-study or teaching, including graduate students and researchers in mathematical and theoretical biology, applied mathematics, and theoretical economics.


Author : Michael J. Benton
Publisher : John Wiley & Sons
Release : 2019-09-30
Page : 400
Category : Science
ISBN 13 : 1119482216
Description :


A newly revised and fully updated edition of the market-leading introduction to paleontology Designed for students and anyone else with an interest in the history of life on our planet, the new edition of this classic text describes the biological evolution of Earth’s organisms, and reconstructs their adaptations and the ecology and environments in which they functioned. Cowen's History of Life, 6th Edition includes major updates, including substantial rewrites to chapters on the origins of eukaryotes, the Cambrian explosion, the terrestrialization of plants and animals, the Triassic recovery of life, the origin of birds, the end-Cretaceous mass extinction, and human evolution. It also features new chapters on plants, soils and transformation of the land; the Mesozoic marine revolution; and the evolution of oceans and climates. Beginning with the origin of the Earth and the earliest life on earth, the book goes on to offer insightful contributions covering: the evolution of Metazoans; the early vertebrates; life of vertebrates on land; and early amniotes and thermoregulation. The book also looks at: dinosaur diversity, as well as their demise; early mammals; the rise of modern mammals; the Neogene Savannas; primates; life in the ice ages; and more. Covers the breadth of the subject in a concise yet specific way for undergrads with no academic background in the topic Reorganizes all chapters to reflect the geological series of events, enabling a new focus on big events Updated with three brand new chapters and numerous revised ones Put together by a new editorial team internationally recognized as the global leaders in paleontology Filled with illustrations and photographs throughout Includes diagrams to show internal structures of organisms, cladograms, time scales and events, and paleogeographic maps Supplemented with a dedicated website that explores additional enriching information and discussion, and which features images for use in visual presentations Cowen's History of Life, 6th Edition is an ideal book for undergraduate students taking courses in introductory paleontology, as well those on global change and earth systems.


Author : Thomas Jansen
Publisher : Springer Science & Business Media
Release : 2013-01-24
Page : 258
Category : Computers
ISBN 13 : 364217339X
Description :


Evolutionary algorithms is a class of randomized heuristics inspired by natural evolution. They are applied in many different contexts, in particular in optimization, and analysis of such algorithms has seen tremendous advances in recent years. In this book the author provides an introduction to the methods used to analyze evolutionary algorithms and other randomized search heuristics. He starts with an algorithmic and modular perspective and gives guidelines for the design of evolutionary algorithms. He then places the approach in the broader research context with a chapter on theoretical perspectives. By adopting a complexity-theoretical perspective, he derives general limitations for black-box optimization, yielding lower bounds on the performance of evolutionary algorithms, and then develops general methods for deriving upper and lower bounds step by step. This main part is followed by a chapter covering practical applications of these methods. The notational and mathematical basics are covered in an appendix, the results presented are derived in detail, and each chapter ends with detailed comments and pointers to further reading. So the book is a useful reference for both graduate students and researchers engaged with the theoretical analysis of such algorithms.


Author : Stefano Cagnoni
Evelyne Lutton
Publisher : Hindawi Publishing Corporation
Release : 2008
Page : 466
Category : Computers
ISBN 13 : 9774540018
Description :



Author : Jonathan H. Turner
Richard S. Machalek
Publisher : Routledge
Release : 2018-03-09
Page : 470
Category : Social Science
ISBN 13 : 1351173863
Description :


For decades, evolutionary analysis was overlooked or altogether ignored by sociologists. Fears and biases persisted nearly a century after Auguste Comte gave the discipline its name, as did concerns that its effect would only reduce sociology to another discipline – whether biology, psychology, or economics. Worse, apprehension that the application of evolutionary theory would encourage heightened perceptions of racism, sexism, ethnocentrism and reductionism pervaded. Turner and Machalek argue instead for a new embrace of biology and evolutionary analysis. Sociology, from its very beginnings in the early 19th century, has always been concerned with the study of evolution, particularly the transformation of societies from simple to ever-more complex forms. By comprehensively reviewing the original ways that sociologists applied evolutionary theory and examining the recent renewal and expansion of these early approaches, the authors confront the challenges posed by biology, neuroscience, and psychology to distinct evolutionary approaches within sociology. They emerge with key theoretical and methodological discoveries that demonstrate the critical – and compelling – case for a dramatically enriched sociology that incorporates all forms of comparative evolutionary analysis to its canon and study of sociocultural phenomena.


Author : Allen G. Rodrigo
Gerald H. Learn Jr.
Publisher : Springer Science & Business Media
Release : 2001
Page : 300
Category : Computers
ISBN 13 : 0792379942
Description :


HIV research is unusual in that it brings together scientists from a wide range of disciplines; clinicians: pathologists, immunologists, epidemiologists, virologists, computational biologists, structural biologists, evolutionary biologists, statisticians and mathematicians. The book seeks to bridge the gap between these groups, in both subject matter and terminology."--BOOK JACKET.


Author : Paramvir Singh Dehal
Publisher :
Release : 2003
Page : 212
Category :
ISBN 13 :
Description :